We now have expertise and pipelines established in the core to cover copy number and SNP-based analysis in single-cell low-input DNA-seq as well as single-cell RNA-seq using low-input or 10x technologies, including CITE-seq. As new technologies become available, more researchers are utilizing low input and single cell sequencing. DNA-seq projects are also common and typically involve identifying variants in single samples compared to the reference genome or between multiple samples compared to each other.

RNA-seq projects are the most common project type in the core, and since joining the core, I have been involved in the analysis of at least 20 RNA-seq projects, primarily to identify differentially expressed genes and pathways between experimental groups. In the core, I have analyzed RNA- and DNA-seq data for diverse projects in many different species. In my role as director of the core, I analyze data, help design omics experiments, and supervise/train other analysts in the analysis of omics data. After my postdoc, I worked as an analyst in my current core for 2.5 years before transitioning to my current role as director.

I led a large whole genome sequencing kidney cancer project and served on two kidney and one pancreatic analysis working groups for The Cancer Genome Atlas (TCGA). For my postdoctoral training, I focused on cancer genome sequencing, variant calling, and integration with RNA-seq data. I integrated the proteomics dataset with genetic QTL and transcriptomic RNA-seq data from the same strains and showed their complementarity. dissertation, I generated a quantitative proteomics dataset from the brain striatum of mouse strains widely divergent in alcohol drinking behavior. in biomedical informatics, I pursued a graduate certificate in applied statistics. As an undergraduate, I double majored in computer science and biochemistry/biophysics. I have been studying and working in the field of bioinformatics since I discovered it as a freshman in college in 2000. Favorite Characters: 4th Doctor, 5th Doctor, 12th Doctor, 13th Doctor, Romana 1, AinleyMaster, River Song, Jack Harkness, Sarah Jane Smith, Tegan Jovanka, Nyssa of Traken, U.N.I.T Favorite Relationships: I've always HCed the Doctor as aro/ace I'm less stringent about that with NuWho, but would prefer no shipping content with Classic Era Doctors. We specialize in computational analysis of omics data, particularly RNA- and DNA-sequencing, quantitative analysis, and variant calling. I am a trained CTI coach working privately and within organisations.I direct the Oregon National Primate Research Center’s Bioinformatics & Biostatistics Core. I have managed project teams and department groups throughout my career, with a view to helping people discover more about their skills, interests and sphere of influence, as opposed to being confined to a pre-set idea of themselves. I am interested in how technology is a mirror to ourselves and a means to positive social change. My interest in technology is very broad, but the area of AI and culture has become a specialism. I write, curate and give talks on the subject of the future and technology. I work internationally on short term and long term projects, often with organisations undergoing transformation. I work across organisations, helping them plan for the future, mark out a distinctive path and energise their cultures accordingly. My clients have included Sony Corporation (Japan), Ericsson (Sweden), Ford (Europe), Reuters (London), Guggenheim (NY), Sony Computer Entertainment (US), BoozAllen (US), Native Instruments (Berlin), Breast Cancer Now (London), Safet圜ulture (Sydney), London Olympics 2012, Southbank Centre (London), Somerset House (London), The Guardian Newspaper Group (London), Oxford Ionics (Oxford), Northwestern University (Doha), Qatar Museums (Doha), Whitney Museum (NY), Nomos Bank (Moscow) and Institute of Contemporary Art (Boston). I often work in creative contexts with arts and culture organisations, but as my core subject is technology, I work across sectors.

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